The detailed information of tRNA gene sequence


Sequence ID>WENV180089525
Genome IDMPMF02089364
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3547
End posion on genome 3457
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcccctcct
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGCCATAAGGGGTCCGTCTCGAAAACGGATAGGCGTGAAAAACG
CCACGTGGGTTCGAATCCCACCCTCTCCGCCg
Downstream region at tRNA end position 
cggtaccgat
Secondary structure (Cloverleaf model)
>WENV180089525	Ser	CGA
                   t      GCCg cggtaccgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        G      | | | | |     G
  G         G C C C       G T G G G     C
  C           | | |                 T T
  C         A G G G
    A T A          G     TAGGCGTGAAAAACGCCAC
                    T - A
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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