The detailed information of tRNA gene sequence


Sequence ID>WENV180089526
Genome IDMPMF02089364
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3421
End posion on genome 3335
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgctcccccg
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCCTAGTGCGCGCGCCTGGAAAGCGCGTAGGGTATTACCCTCG
TGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
accgggccga
Secondary structure (Cloverleaf model)
>WENV180089526	Ser	GGA
                   g      GCCA accgggccga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TAGGGTATTACCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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