The detailed information of tRNA gene sequence


Sequence ID>WENV180089537
Genome IDMPMF02089670
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1252
End posion on genome 1176
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaaaaaattg
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGCTAGAGCGTCTGGTTTACACCCAGAAGGTCGGGGGTTCGAC
TCCCTCAGCGCCCACCA
Downstream region at tRNA end position 
tttttataac
Secondary structure (Cloverleaf model)
>WENV180089537	Val	TAC
                   g      ACCA tttttataac
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T C
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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