The detailed information of tRNA gene sequence


Sequence ID>WENV180089542
Genome IDMPMF02089779
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 112
End posion on genome 37
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aaaaccgcag
tRNA gene sequence 
GCCCCTATAGCTCAATTGGTAGAGCAACTGATTTGTAATCAGTAGGTTGGGAGTTCGAGT
CTCTCTGGGGGCCCCA
Downstream region at tRNA end position 
atattttcaa
Secondary structure (Cloverleaf model)
>WENV180089542	Thr	TGT
                   g      CCCA atattttcaa
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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