The detailed information of tRNA gene sequence


Sequence ID>WENV180089574
Genome IDMPMF02091222
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 505
End posion on genome 578
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgggaacac
tRNA gene sequence 
AGGGCAGTGGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGCGGTTGGGGGTTCGAGT
CCCTCCTGCCCTGCaa
Downstream region at tRNA end position 
ggccagtcgg
Secondary structure (Cloverleaf model)
>WENV180089574	Trp	CCA
                   c      GCaa ggccagtcgg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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