The detailed information of tRNA gene sequence


Sequence ID>WENV180089622
Genome IDMPMF02093167
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2773
End posion on genome 2865
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacctgaatt
tRNA gene sequence 
GGAAGCGTGGGTGAGCTGGTTTAAACCAACGGATTGCTAATTCGTCGATGGTCGTAAGAT
CATCCAAGAGTTCGAATCTCTTCGCTTCCGCCA
Downstream region at tRNA end position 
ggttaattta
Secondary structure (Cloverleaf model)
>WENV180089622	Ser	GCT
                   t      GCCA ggttaattta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T T C T C     A
    T C G A        G      | | | | |     G
  G         G T G G       A A G A G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGATGGTCGTAAGATCATCC
                    A - T
                    C - G
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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