The detailed information of tRNA gene sequence


Sequence ID>WENV180089650
Genome IDMPMF02095065
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 85
End posion on genome 10
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gtgctgcttt
tRNA gene sequence 
GGGCCGGTAGCTCAGTCGGTTAGAGCAAGCGACTCATAATCGCTGGGTCGGGGGTTCGAG
TCCCTCCCGGCCTACCt
Downstream region at tRNA end position 
gtcggtttnn
Secondary structure (Cloverleaf model)
>WENV180089650	Ile2	CAT
                   t      ACCt gtcggtttnn
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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