The detailed information of tRNA gene sequence


Sequence ID>WENV180089663
Genome IDMPMF02096225
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 6752
End posion on genome 6663
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tattaaatta
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGCTTGCTTGGAGTGCAAGTGAACGAGTAATCGTT
CCGCAGGTTCGAATCCTGTCTTCTCCGCCA
Downstream region at tRNA end position 
atttattata
Secondary structure (Cloverleaf model)
>WENV180089663	Ser	GGA
                   a      GCCA atttattata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAACGAGTAATCGTTCC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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