The detailed information of tRNA gene sequence


Sequence ID>WENV180089690
Genome IDMPMF02097334
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 7491
End posion on genome 7583
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgtgttaac
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTTTATAGCT
CCATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gaaacccagc
Secondary structure (Cloverleaf model)
>WENV180089690	Ser	GCT
                   c      GCCA gaaacccagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGTTTATAGCTCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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