The detailed information of tRNA gene sequence


Sequence ID>WENV180089702
Genome IDMPMF02097825
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 454
End posion on genome 378
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atcaacccaa
tRNA gene sequence 
AGGGGAATAGTTCAGCTTGGTAGAACGCTTGCTTTGGGAGCAAGAGGTCGCACGTTCAAA
TCGTGTTTCCCCTACCA
Downstream region at tRNA end position 
acattataat
Secondary structure (Cloverleaf model)
>WENV180089702	Pro	TGG
                   a      ACCA acattataat
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T G T G C     A
      C G A        A      + | | | |     A
    T       C T T G       G C A C G     C
    T       | | | |                 T T
    G       G A A C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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