The detailed information of tRNA gene sequence


Sequence ID>WENV180089721
Genome IDMPMF02099622
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2718
End posion on genome 2626
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caatgacagc
tRNA gene sequence 
GGAGAGATGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTAAGGGGGGAAACTT
CCTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaaacaatc
Secondary structure (Cloverleaf model)
>WENV180089721	Ser	GCT
                   c      GCCA aaaaacaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAAGGGGGGAAACTTCCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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