The detailed information of tRNA gene sequence


Sequence ID>WENV180089728
Genome IDMPMF02100029
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 155
End posion on genome 232
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atagaaagaa
tRNA gene sequence 
AGGTCTGTAGCTCTAATCGGCTAGAGCACCGGATTCCAAATCCGGGTGTTGGGGGTTCGA
GTCCCTCCAGACCTGCCA
Downstream region at tRNA end position 
gacaatttta
Secondary structure (Cloverleaf model)
>WENV180089728	Trp	CCA
                   a      GCCA gacaatttta
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
    T A A T        A      | + | | |     G
  C         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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