The detailed information of tRNA gene sequence


Sequence ID>WENV180089758
Genome IDMPMF02102190
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2261
End posion on genome 2185
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atttaaatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCGGCGGTTCAAA
TCCGTCCCCCGCAACCA
Downstream region at tRNA end position 
aagcaacagc
Secondary structure (Cloverleaf model)
>WENV180089758	fMet	CAT
                   t      ACCA aagcaacagc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      T G A        G      | + | | |     A
    C       C G A G       G G C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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