The detailed information of tRNA gene sequence


Sequence ID>WENV180089761
Genome IDMPMF02102588
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1318
End posion on genome 1393
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcctggtgc
tRNA gene sequence 
GGCGGAGTAGCTCAGTCGGTAGAGCAGGGGAATCATAATCCCTGTGTCGGGGGTTCAAGT
CCCTCCTCCGCTACCA
Downstream region at tRNA end position 
gccaaacatc
Secondary structure (Cloverleaf model)
>WENV180089761	Met	CAT
                   c      ACCA gccaaacatc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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