The detailed information of tRNA gene sequence


Sequence ID>WENV180089803
Genome IDMPMF02105469
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2238
End posion on genome 2151
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttgagcct
tRNA gene sequence 
GGAGAGGTCGCATAGTCTGGCTTAGTGCGCTCGCTTGGAAAGCGAGTATGGCGAGAGCCA
TCGTGGGTTCGAATCCCACCCTCTCCGCtc
Downstream region at tRNA end position 
ccgggggcaa
Secondary structure (Cloverleaf model)
>WENV180089803	Ser	GGA
                   t      GCtc ccgggggcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G T G G G     C
  G         + | | |                 T T
  G         G T G C
    C T T A        G     TATGGCGAGAGCCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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