The detailed information of tRNA gene sequence


Sequence ID>WENV180089808
Genome IDMPMF02105735
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1583
End posion on genome 1509
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcaagggtgT
tRNA gene sequence 
GGGCGCATAACTCAGTGGAAGAGTGCAATCCTCACACGGTTGAAGCCGTAGGTTCAAATC
CTACTGCGCCCATCa
Downstream region at tRNA end position 
tagaagcacc
Secondary structure (Cloverleaf model)
>WENV180089808	Val	CAC
                   T      ATCa tagaagcacc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          T A
                    T     C A T C C     A
        G A        A      | | | | |     A
      T     C T C A       G T A G G     C
      G     | | | |                 T T
      G     G A G T
        A A        G     AAGCC
                    C - G
                    A - T
                    A - T
                    T + G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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