The detailed information of tRNA gene sequence


Sequence ID>WENV180089825
Genome IDMPMF02106030
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 12435
End posion on genome 12511
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tccgaggttc
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGCCTAGAGCAGCCGGCTCATAACCGGTAGGTCCCAGGTTCGAA
TCCTGGCGGGCCCACCA
Downstream region at tRNA end position 
gatcacatca
Secondary structure (Cloverleaf model)
>WENV180089825	Ile2	CAT
                   c      ACCA gatcacatca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G T C C     A
      C G A        A      | | | | |     G
    G       C T C G       C C A G G     C
    G       | | | |                 T T
    C       G A G C
      C T A        A     AGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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