The detailed information of tRNA gene sequence


Sequence ID>WENV180089855
Genome IDMPMF02107534
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 542
End posion on genome 625
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtagacatgT
tRNA gene sequence 
GACACTGTGTCCGAGCGGTTGAGGAGATGGACTCGAAATCCATTGGGCTCTGCCCGCAGG
GGTTCGAATCCCCTCGGTGTCGTtt
Downstream region at tRNA end position 
gtcaggctgc
Secondary structure (Cloverleaf model)
>WENV180089855	Ser	CGA
                   T      GTtt gtcaggctgc
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     G - C          T A
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       A G G G G     C
    G         | | |                 T T
    T       A G G A
      T G          G     TGGGCTCTGCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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