The detailed information of tRNA gene sequence


Sequence ID>WENV180089906
Genome IDMPMF02109517
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1653
End posion on genome 1742
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atctaaatta
tRNA gene sequence 
GGAAAGGTGGCTGAGTGGTCGAAAGCGCTTGCTTGGAGTGCAAGTGAACAAGAAATTGTT
CCGCAGGTTCGAATCCTGTCCTTTCCGCCA
Downstream region at tRNA end position 
tttatttata
Secondary structure (Cloverleaf model)
>WENV180089906	Ser	GGA
                   a      GCCA tttatttata
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAACAAGAAATTGTTCC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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