The detailed information of tRNA gene sequence


Sequence ID>WENV180089908
Genome IDMPMF02109517
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 5989
End posion on genome 5913
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaatatca
tRNA gene sequence 
GGCAGGGTAGCTCAGTTGGTTAGAGCGCAGGACTCATAAGCCTGAGGTCGCGAGTTCAAT
TCTCGCCCCTGCTACCA
Downstream region at tRNA end position 
tagatattgt
Secondary structure (Cloverleaf model)
>WENV180089908	Met	CAT
                   a      ACCA tagatattgt
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T T
                    T     C G C T C     A
      T G A        A      | | | | |     A
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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