The detailed information of tRNA gene sequence


Sequence ID>WENV180089919
Genome IDMPMF02109879
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 807
End posion on genome 732
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttattgttgt
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGCTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tccacgtcct
Secondary structure (Cloverleaf model)
>WENV180089919	Trp	CCA
                   t      GCCA tccacgtcct
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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