The detailed information of tRNA gene sequence


Sequence ID>WENV180089920
Genome IDMPMF02109912
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 494
End posion on genome 583
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttagaaac
tRNA gene sequence 
GGAGAGATGTGAGAGCGGTTTAATCAGCACGCTTGGAAAGCGTGTATAGTGGCAACACTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaactcctg
Secondary structure (Cloverleaf model)
>WENV180089920	Ser	GGA
                   c      GCCA aaaactcctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A G T       G A G G G     C
    G         | | |                 T T
    T       A T C A
      T T A        G     TATAGTGGCAACACTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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