The detailed information of tRNA gene sequence


Sequence ID>WENV180089967
Genome IDMPMF02112548
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2106
End posion on genome 2196
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cattaagaaa
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGCACGCTTGGAAAGCGTGTAAGGGTTAATAGCCC
TTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttaaaagctc
Secondary structure (Cloverleaf model)
>WENV180089967	Ser	GGA
                   a      GCCA ttaaaagctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TAAGGGTTAATAGCCCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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