The detailed information of tRNA gene sequence


Sequence ID>WENV180090008
Genome IDMPMF02114735
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 885
End posion on genome 961
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tcggagcgcc
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGCCTAGAGCAGCCGGCTCATAACCGGTAGGTCCCAGGTTCGAA
TCCTGGCGGGCCCACCA
Downstream region at tRNA end position 
atcgcaccgg
Secondary structure (Cloverleaf model)
>WENV180090008	Ile2	CAT
                   c      ACCA atcgcaccgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G T C C     A
      C G A        A      | | | | |     G
    G       C T C G       C C A G G     C
    G       | | | |                 T T
    C       G A G C
      C T A        A     AGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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