The detailed information of tRNA gene sequence


Sequence ID>WENV180090021
Genome IDMPMF02115629
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2112
End posion on genome 2023
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttttttttc
tRNA gene sequence 
GGAGGGATCGCATAGTCTGGCCTAGTGCGCACGCTTGGAAAGCGTGTAAGGGTTTATCCC
CTTCGAGGGTTCGAATCCCTCTCCCTCCGCaa
Downstream region at tRNA end position 
aaaaataata
Secondary structure (Cloverleaf model)
>WENV180090021	Ser	GGA
                   c      GCaa aaaaataata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TAAGGGTTTATCCCCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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