The detailed information of tRNA gene sequence


Sequence ID>WENV180090049
Genome IDMPMF02117399
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 29829
End posion on genome 29918
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgtcaacgt
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTTTATCGGGCTCGCCTGGAAAGCGTGTAAAGGGGCAACCCTT
TCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ctcacccgca
Secondary structure (Cloverleaf model)
>WENV180090049	Ser	GGA
                   t      GCCA ctcacccgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T T A        G     TAAAGGGGCAACCCTTTC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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