The detailed information of tRNA gene sequence


Sequence ID>WENV180090054
Genome IDMPMF02117824
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1488
End posion on genome 1577
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaactcaat
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGCACGCTTGGAAAGTGTGTGTACCCTCACAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aattgtagta
Secondary structure (Cloverleaf model)
>WENV180090054	Ser	GGA
                   t      GCCA aattgtagta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACCCTCACAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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