The detailed information of tRNA gene sequence


Sequence ID>WENV180090081
Genome IDMPMF02119194
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 258
End posion on genome 166
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcttaataat
tRNA gene sequence 
GGAGGTGAATGAGCGCCTGGTGGGCTCCCCGGTCTTCAAAACTGGTGAAAGGTTTAATAA
TCTTTGGCGGGTTCGATTCCCGTCCACCTCCGCta
Downstream region at tRNA end position 
attaatctag
Secondary structure (Cloverleaf model)
>WENV180090081	SeC	TCA
                   t      GCta attaatctag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A   C          T T
                    A     T G C C C     A
      C C G        T      + | | | |     G
    T       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T G G        C     TGAAAGGTTTAATAATCTTTG
                    C - G
                    C - G
                    G + T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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