The detailed information of tRNA gene sequence


Sequence ID>WENV180090107
Genome IDMPMF02120398
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 522
End posion on genome 445
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttcgagtctC
tRNA gene sequence 
GGCGCATTCGTCTAGTGGCCAAGGACATCGCCCTCTCAAGGCGAAGATCGCGGGTTCGAA
TCCCGCATGCGCCGCCC
Downstream region at tRNA end position 
gaagctcgtc
Secondary structure (Cloverleaf model)
>WENV180090107	Glu	CTC
                   C      GCCC gaagctcgtc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    C       G G A C
      C A A        A     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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