The detailed information of tRNA gene sequence


Sequence ID>WENV180090114
Genome IDMPMF02120997
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 265
End posion on genome 190
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctcgggtctc
tRNA gene sequence 
GTCCCCTTCGTCTAGAGGCCTAGGACACCGCCCTCTCACGGCGGCAACAGGGGTTCGAAT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position 
actttttcaa
Secondary structure (Cloverleaf model)
>WENV180090114	Glu	CTC
                   c      GCCA actttttcaa
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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