The detailed information of tRNA gene sequence


Sequence ID>WENV180090139
Genome IDMPMF02122621
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 944
End posion on genome 1017
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aagtccgcct
tRNA gene sequence 
GGGGACGTAGCTCAATTGGGAGAGCACCGGCTTTGCAAGCCGGGGGTTGAGGGTTCGAGC
CCCTTCGTCTCCACtt
Downstream region at tRNA end position 
cttttaannn
Secondary structure (Cloverleaf model)
>WENV180090139	Ala	TGC
                   t      ACtt cttttaannn
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          C G
                    T     T T C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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