The detailed information of tRNA gene sequence


Sequence ID>WENV180090156
Genome IDMPMF02123670
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1133
End posion on genome 1209
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cggggttggg
tRNA gene sequence 
AGGCCAGTAGCTCCAATTGGTAGAGCACCGGACTCCAAATCCGGGGGTTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
aaacactctt
Secondary structure (Cloverleaf model)
>WENV180090156	Trp	CCA
                   g      GCCA aaacactctt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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