The detailed information of tRNA gene sequence


Sequence ID>WENV180090209
Genome IDMPMF02126908
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2255
End posion on genome 2179
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnattgggg
tRNA gene sequence 
GGGGTCGTAGTTCAACTGGTTAGAGCACCGGCCTGTCACGCCGGAAGTTGCGGGTTCGAG
TCCCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ctaacttatt
Secondary structure (Cloverleaf model)
>WENV180090209	Asp	GTC
                   g      GCCA ctaacttatt
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      C A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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