The detailed information of tRNA gene sequence


Sequence ID>WENV180090215
Genome IDMPMF02127285
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3212
End posion on genome 3301
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccaggccgcc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTATACGTTTACGCGTA
TCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
attattcttt
Secondary structure (Cloverleaf model)
>WENV180090215	Ser	GGA
                   c      GCCA attattcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGTTTACGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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