The detailed information of tRNA gene sequence


Sequence ID>WENV180090243
Genome IDMPMF02129467
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 24
End posion on genome 99
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaactcttt
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGAGC
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
agtaatggaa
Secondary structure (Cloverleaf model)
>WENV180090243	Trp	CCA
                   t      GCCA agtaatggaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          C G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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