The detailed information of tRNA gene sequence


Sequence ID>WENV180090258
Genome IDMPMF02130629
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 518
End posion on genome 594
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ctgtattttc
tRNA gene sequence 
GCCCTCGTAGCTCAGTCGGATAGAGCGACCGCCTCCTAAGCGGTAGGCCGCAGGTTCGAT
TCCTGCCGAGGGCGCCA
Downstream region at tRNA end position 
taatgtattt
Secondary structure (Cloverleaf model)
>WENV180090258	Arg	CCT
                   c      GCCA taatgtattt
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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