The detailed information of tRNA gene sequence


Sequence ID>WENV180090286
Genome IDMPMF02132629
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 19
End posion on genome 107
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttaatcatc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTTAAGGAGCACGCTTGGAAAGCGTGTGTGCGTTAATAGCGT
ACCGTGGGTTCGAATCCCACCCTCTCCGCtt
Downstream region at tRNA end position 
taccctcatg
Secondary structure (Cloverleaf model)
>WENV180090286	Ser	GGA
                   c      GCtt taccctcatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGTGCGTTAATAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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