The detailed information of tRNA gene sequence


Sequence ID>WENV180090300
Genome IDMPMF02133130
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 497
End posion on genome 587
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgagaaatcT
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGCTTAAGGCGCACGCCTGCTAAGTGTGTGTAGGCTTAACCCC
TACCGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
gaacttaatt
Secondary structure (Cloverleaf model)
>WENV180090300	Ser	GCT
                   T      GTtt gaacttaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T T A          G     TGTAGGCTTAACCCCTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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