The detailed information of tRNA gene sequence


Sequence ID>WENV180090320
Genome IDMPMF02134084
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 418489
End posion on genome 418580
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctgatccgt
tRNA gene sequence 
GGAGGGGTCGCATAGTGGCCTAGTGCGGGCGCCTGCTAAGCGCTTACTCCGTTGATTCGG
GGTCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ctccgccccc
Secondary structure (Cloverleaf model)
>WENV180090320	Ser	GCT
                   t      GCCA ctccgccccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TACTCCGTTGATTCGGGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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