The detailed information of tRNA gene sequence


Sequence ID>WENV180090323
Genome IDMPMF02134084
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 299905
End posion on genome 299829
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gttcagatcc
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTACGAGCGCTCGCTTCACACGCGAGAGGTCACTGGTTCAAG
TCCAGTACCGCCCACCA
Downstream region at tRNA end position 
accaaaggag
Secondary structure (Cloverleaf model)
>WENV180090323	Val	CAC
                   c      ACCA accaaaggag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A C        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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