The detailed information of tRNA gene sequence


Sequence ID>WENV180090355
Genome IDMPMF02135310
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 309
End posion on genome 386
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aaaataacat
tRNA gene sequence 
GGGCCTGTAGCTCAGTCAGGTTAGAGCAGTACACTCATAATGTATTGGTCCCAGGTTCGA
ATCCTGGCGGGCCCACCA
Downstream region at tRNA end position 
aagttcccct
Secondary structure (Cloverleaf model)
>WENV180090355	Ile2	CAT
                   t      ACCA aagttcccct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G T C C     A
    C T G A        A      | | | | |     G
  A         C T C G       C C A G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     TGGTC
                    G + T
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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