The detailed information of tRNA gene sequence


Sequence ID>WENV180090359
Genome IDMPMF02135700
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 26
End posion on genome 100
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ggtccaacga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCGGGTTCAAA
TCCCGCCCCCGCTACaa
Downstream region at tRNA end position 
agaaacccca
Secondary structure (Cloverleaf model)
>WENV180090359	fMet	CAT
                   a      ACaa agaaacccca
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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