The detailed information of tRNA gene sequence


Sequence ID>WENV180090385
Genome IDMPMF02137300
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 27167
End posion on genome 27240
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgccacgcct
tRNA gene sequence 
GGCGGTGTAGCTCAGTCGGCAGAGCAGGCGGCTCATATCCGCCGAGTCGGGGGTTCAAGT
CCCTCCACCGCCACtc
Downstream region at tRNA end position 
tttcttagcc
Secondary structure (Cloverleaf model)
>WENV180090385	Met	CAT
                   t      ACtc tttcttagcc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GAGTC
                    G - C
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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