The detailed information of tRNA gene sequence


Sequence ID>WENV180090394
Genome IDMPMF02137417
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3965
End posion on genome 3875
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgctctcc
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTTGAAGGTGCTCGCCTGGAAAGCGTGTGTACGTCAAAAGCGT
ACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ataacacaat
Secondary structure (Cloverleaf model)
>WENV180090394	Ser	GGA
                   c      GCCA ataacacaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    T       A G G T
      T G A        G     TGTACGTCAAAAGCGTACC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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