The detailed information of tRNA gene sequence


Sequence ID>WENV180090402
Genome IDMPMF02138042
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1079
End posion on genome 1003
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaaagtgat
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCACAGGACTCATAAGCCTGGGGTCGGCGGTTCGAA
TCCGCCCCCCGCTACCA
Downstream region at tRNA end position 
tttgagctaa
Secondary structure (Cloverleaf model)
>WENV180090402	Met	CAT
                   t      ACCA tttgagctaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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