The detailed information of tRNA gene sequence


Sequence ID>WENV180090404
Genome IDMPMF02138083
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 13291
End posion on genome 13217
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gcctcacgta
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTCAGAGCCGCCGGCTCATAACCGGTAGGTCCCAGGTTCGAG
TCCTGGAGGGCCCACtt
Downstream region at tRNA end position 
gtacccgtcg
Secondary structure (Cloverleaf model)
>WENV180090404	Ile2	CAT
                   a      ACtt gtacccgtcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        C     AGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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