The detailed information of tRNA gene sequence


Sequence ID>WENV180090435
Genome IDMPMF02139270
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 131
End posion on genome 41
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaagataaaa
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGAATGCGGTGGTCTTGAAAACCATTGACGGGTAATCCTCG
TCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gatcaaagaa
Secondary structure (Cloverleaf model)
>WENV180090435	Ser	TGA
                   a      GCCA gatcaaagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGACGGGTAATCCTCGTCC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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