The detailed information of tRNA gene sequence


Sequence ID>WENV180090440
Genome IDMPMF02139579
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3898
End posion on genome 3974
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gctgcaggcc
tRNA gene sequence 
GCCCCGGTAGCTCAACTGGATAGAGCAACGGATTTCTAATCCGTAGGTTGTGGGTTCAAG
TCCCGCCCGGGGTACCA
Downstream region at tRNA end position 
cttgtttttc
Secondary structure (Cloverleaf model)
>WENV180090440	Arg	TCT
                   c      ACCA cttgtttttc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G C C C     A
      C A A        A      | + | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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