The detailed information of tRNA gene sequence


Sequence ID>WENV180090477
Genome IDMPMF02141605
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2552
End posion on genome 2647
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
attggtcagt
tRNA gene sequence 
GGAAGGGGGACGCATTCCGGTGATGCGCGCGGGCTTCAAACCCGTTGAGGGGCGTTAGAC
GCGCCTGGTGGGTTCGACTCCCACTCCTTTCCGCCA
Downstream region at tRNA end position 
attccttcca
Secondary structure (Cloverleaf model)
>WENV180090477	SeC	TCA
                   t      GCCA attccttcca
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     G - C
                     G - C
                     G + T          T C
                    G     C A C C C     A
      C T T        A      | | | | |     G
    C       A C G C       G T G G G     C
    G       | | | |                 T T
    G       T G C G
      T G A        C     TGAGGGGCGTTAGACGCGCCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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