The detailed information of tRNA gene sequence


Sequence ID>WENV180090525
Genome IDMPMF02144303
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 7441
End posion on genome 7346
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atagacatct
tRNA gene sequence 
GGAAGGGGATCGCACCCCGGTGGGGCGCCCGGTCTTCAAAACCGGTGAGGGGCGCCAAGC
GTGCCTGGTGGGTTCGACTCCCACCCTCTTCCGCCA
Downstream region at tRNA end position 
tttgccacca
Secondary structure (Cloverleaf model)
>WENV180090525	SeC	TCA
                   t      GCCA tttgccacca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    C       A C G C       G T G G G     C
    G         | | |                 T T
    G       G G C G
      T G G        C     TGAGGGGCGCCAAGCGTGCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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